ACM/IEEE Intl. Conf. for High Perf. Computing, Networking, Storage and Analysis, SC 2018


Title/Authors Title Research Artifacts
[?] A research artifact is any by-product of a research project that is not directly included in the published research paper. In Computer Science research this is often source code and data sets, but it could also be media, documentation, inputs to proof assistants, shell-scripts to run experiments, etc.
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PruneJuice: pruning trillion-edge graphs to a precise pattern-matching solution

Tahsin Reza, Matei Ripeanu, Nicolas Tripoul, Geoffrey Sanders, Roger Pearce

PruneJuice: pruning trillion-edge graphs to a precise pattern-matching solution

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Energy efficiency modeling of parallel applications

Mark Endrei, Chao Jin, Minh Ngoc Dinh, David Abramson, Heidi Poxon, Luiz DeRose, Bronis R. de Supinski

Energy efficiency modeling of parallel applications

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Distributed memory sparse inverse covariance matrix estimation on high-performance computing architectures

Aryan Eftekhari, Matthias Bollhöfer, Olaf Schenk

Distributed memory sparse inverse covariance matrix estimation on high-performance computing architectures

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Extreme scale de novo metagenome assembly

Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Eugene Goltsman, Bill Arndt, Andrew Tritt, Aydin Buluç, Leonid Oliker, Katherine A. Yelick

Extreme scale de novo metagenome assembly

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A year in the life of a parallel file system

Glenn K. Lockwood, Shane Snyder, Teng Wang, Suren Byna, Philip H. Carns, Nicholas J. Wright

A year in the life of a parallel file system

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Author Comments: Unless exact reproducibility is desired, more up-to-date code and datasets are available through the Zenodo links.
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GPU age-aware scheduling to improve the reliability of leadership jobs on Titan

Christopher Zimmer, Don Maxwell, Stephen McNally, Scott Atchley, Sudharshan S. Vazhkudai

GPU age-aware scheduling to improve the reliability of leadership jobs on Titan

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Best practices and lessons from deploying and operating a sustained-petascale system: the blue waters experience

Gregory H. Bauer, Brett M. Bode, Jeremy Enos, William T. Kramer, Scott Lathrop, Celso L. Mendes, Robert Sisneros

Best practices and lessons from deploying and operating a sustained-petascale system: the blue waters experience

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FlipTracker: understanding natural error resilience in HPC applications

Luanzheng Guo, Dong Li, Ignacio Laguna, Martin Schulz

FlipTracker: understanding natural error resilience in HPC applications

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Phase asynchronous AMR execution for productive and performant astrophysical flows

Muhammed Nufail Farooqi, Tan Nguyen, Weiqun Zhang, Ann S. Almgren, John Shalf, Didem Unat

Phase asynchronous AMR execution for productive and performant astrophysical flows

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Exascale deep learning for climate analytics

Thorsten Kurth, Sean Treichler, Joshua Romero, Mayur Mudigonda, Nathan Luehr, Everett H. Phillips, Ankur Mahesh, Michael Matheson, Jack Deslippe, Massimiliano Fatica, Prabhat, Michael Houston

Exascale deep learning for climate analytics

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Cooperative rendezvous protocols for improved performance and overlap

Sourav Chakraborty, Mohammadreza Bayatpour, Jahanzeb Maqbool Hashmi, Hari Subramoni, Dhabaleswar K. Panda

Cooperative rendezvous protocols for improved performance and overlap

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RM-replay: a high-fidelity tuning, optimization and exploration tool for resource management

Maxime Martinasso, Miguel Gila, Mauro Bianco, Sadaf R. Alam, Colin McMurtrie, Thomas C. Schulthess

RM-replay: a high-fidelity tuning, optimization and exploration tool for resource management

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Evaluating and accelerating high-fidelity error injection for HPC

Chun-Kai Chang, Sangkug Lym, Nicholas Kelly, Michael B. Sullivan, Mattan Erez

Evaluating and accelerating high-fidelity error injection for HPC

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CosmoFlow: using deep learning to learn the universe at scale

Amrita Mathuriya, Deborah Bard, Peter Mendygral, Lawrence Meadows, James Arnemann, Lei Shao, Siyu He, Tuomas Kärnä, Diana Moise, Simon J. Pennycook, Kristyn J. Maschhoff, Jason Sewall, Nalini Kumar, Shirley Ho, Michael F. Ringenburg, Prabhat, Victor W. Lee

CosmoFlow: using deep learning to learn the universe at scale

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Distributed-memory hierarchical compression of dense SPD matrices

Chenhan D. Yu, Severin Reiz, George Biros

Distributed-memory hierarchical compression of dense SPD matrices

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bespoKV: application tailored scale-out key-value stores

Ali Anwar, Yue Cheng, Hai Huang, Jingoo Han, Hyogi Sim, Dongyoon Lee, Fred Douglis, Ali Raza Butt

bespoKV: application tailored scale-out key-value stores

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Partial redundancy in HPC systems with non-uniform node reliabilities

Zaeem Hussain, Taieb Znati, Rami G. Melhem

Partial redundancy in HPC systems with non-uniform node reliabilities

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Harnessing GPU tensor cores for fast FP16 arithmetic to speed up mixed-precision iterative refinement solvers

Azzam Haidar, Stanimire Tomov, Jack J. Dongarra, Nicholas J. Higham

Harnessing GPU tensor cores for fast FP16 arithmetic to speed up mixed-precision iterative refinement solvers

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SP-cache: load-balanced, redundancy-free cluster caching with selective partition

Yinghao Yu, Renfei Huang, Wei Wang, Jun Zhang, Khaled Ben Letaief

SP-cache: load-balanced, redundancy-free cluster caching with selective partition

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A fast scalable implicit solver for nonlinear time-evolution earthquake city problem on low-ordered unstructured finite elements with artificial intelligence and transprecision computing

Tsuyoshi Ichimura, Kohei Fujita, Takuma Yamaguchi, Akira Naruse, Jack C. Wells, Thomas C. Schulthess, Tjerk P. Straatsma, Christopher Zimmer, Maxime Martinasso, Kengo Nakajima, Muneo Hori, Lalith Maddegedara

A fast scalable implicit solver for nonlinear time-evolution earthquake city problem on low-ordered unstructured finite elements with artificial intelligence and transprecision computing

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Exploring flexible communications for streamlining DNN ensemble training pipelines

Randall Pittman, Hui Guan, Xipeng Shen, Seung-Hwan Lim, Robert M. Patton

Exploring flexible communications for streamlining DNN ensemble training pipelines

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DRAGON: breaking GPU memory capacity limits with direct NVM access

Pak Markthub, Mehmet E. Belviranli, Seyong Lee, Jeffrey S. Vetter, Satoshi Matsuoka

DRAGON: breaking GPU memory capacity limits with direct NVM access

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A parallelism profiler with what-if analyses for OpenMP programs

Nader Boushehrinejadmoradi, Adarsh Yoga, Santosh Nagarakatte

A parallelism profiler with what-if analyses for OpenMP programs

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Attacking the opioid epidemic: determining the epistatic and pleiotropic genetic architectures for chronic pain and opioid addiction

Wayne Joubert, Deborah A. Weighill, David Kainer, Sharlee Climer, Amy Justice, Kjiersten Fagnan, Daniel A. Jacobson

Attacking the opioid epidemic: determining the epistatic and pleiotropic genetic architectures for chronic pain and opioid addiction

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Adaptive anonymization of data using b-edge cover

Arif Khan, Krzysztof Choromanski, Alex Pothen, S. M. Ferdous, Mahantesh Halappanavar, Antonino Tumeo

Adaptive anonymization of data using b-edge cover

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Runtime-assisted cache coherence deactivation in task parallel programs

Paul Caheny, Lluc Alvarez, Mateo Valero, Miquel Moretó, Marc Casas

Runtime-assisted cache coherence deactivation in task parallel programs

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A reference architecture for datacenter scheduling: design, validation, and experiments

Georgios Andreadis, Laurens Versluis, Fabian Mastenbroek, Alexandru Iosup

A reference architecture for datacenter scheduling: design, validation, and experiments

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Doomsday: predicting which node will fail when on supercomputers

Anwesha Das, Frank Mueller, Paul Hargrove, Eric Roman, Scott B. Baden

Doomsday: predicting which node will fail when on supercomputers

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Simulating the weak death of the Neutron in a femtoscale universe with near-exascale computing

Evan Berkowitz, Michael A. Clark, Arjun Singh Gambhir, Kenneth McElvain, Amy Nicholson, Enrico Rinaldi, Pavlos Vranas, André Walker-Loud, Chia-Cheng Chang, Bálint Joó, Thorsten Kurth, Kostas Orginos

Simulating the weak death of the Neutron in a femtoscale universe with near-exascale computing

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Performance evaluation of a vector supercomputer SX-aurora TSUBASA

Kazuhiko Komatsu, Shintaro Momose, Yoko Isobe, Osamu Watanabe, Akihiro Musa, Mitsuo Yokokawa, Toshikazu Aoyama, Masayuki Sato, Hiroaki Kobayashi

Performance evaluation of a vector supercomputer SX-aurora TSUBASA

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iSpan: parallel identification of strongly connected components with spanning trees

Yuede Ji, Hang Liu, H. Howie Huang

iSpan: parallel identification of strongly connected components with spanning trees

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Dynamic data race detection for OpenMP programs

Yizi Gu, John M. Mellor-Crummey

Dynamic data race detection for OpenMP programs

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Dac-Man: data change management for scientific datasets on HPC systems

Devarshi Ghoshal, Lavanya Ramakrishnan, Deborah A. Agarwal

Dac-Man: data change management for scientific datasets on HPC systems

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Simulating the Wenchuan earthquake with accurate surface topography on Sunway TaihuLight

Bingwei Chen, Haohuan Fu, Yanwen Wei, Conghui He, Wenqiang Zhang, Yuxuan Li, Wubin Wan, Wei Zhang, Lin Gan, Wei Zhang, Zhenguo Zhang, Guangwen Yang, Xiaofei Chen

Simulating the Wenchuan earthquake with accurate surface topography on Sunway TaihuLight

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Many-core graph workload analysis

Stijn Eyerman, Wim Heirman, Kristof Du Bois, Joshua B. Fryman, Ibrahim Hur

Many-core graph workload analysis

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A divide and conquer algorithm for DAG scheduling under power constraints

Gökalp Demirci, Ivana Marincic, Henry Hoffmann

A divide and conquer algorithm for DAG scheduling under power constraints

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Topology-aware space-shared co-analysis of large-scale molecular dynamics simulations

Preeti Malakar, Todd Munson, Christopher Knight, Venkatram Vishwanath, Michael E. Papka

Topology-aware space-shared co-analysis of large-scale molecular dynamics simulations

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Fine-grained, multi-domain network resource abstraction as a fundamental primitive to enable high-performance, collaborative data sciences

Qiao Xiang, J. Jensen Zhang, X. Tony Wang, Y. Jace Liu, Chin Guok, Franck Le, John MacAuley, Harvey Newman, Yang Richard Yang

Fine-grained, multi-domain network resource abstraction as a fundamental primitive to enable high-performance, collaborative data sciences

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Exploiting idle resources in a high-radix switch for supplemental storage

Matthias A. Blumrich, Nan Jiang, Larry R. Dennison

Exploiting idle resources in a high-radix switch for supplemental storage

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Optimizing high performance distributed memory parallel hash tables for DNA k-mer counting

Tony C. Pan, Sanchit Misra, Srinivas Aluru

Optimizing high performance distributed memory parallel hash tables for DNA k-mer counting

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TriCore: parallel triangle counting on GPUs

Yang Hu, Hang Liu, H. Howie Huang

TriCore: parallel triangle counting on GPUs

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Framework for scalable intra-node collective operations using shared memory

Surabhi Jain, Rashid Kaleem, Marc Gamell Balmana, Akhil Langer, Dmitry Durnov, Alexander Sannikov, Maria Garzaran

Framework for scalable intra-node collective operations using shared memory

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Computing planetary interior normal modes with a highly parallel polynomial filtering eigensolver

Jia Shi, Ruipeng Li, Yuanzhe Xi, Yousef Saad, Maarten V. de Hoop

Computing planetary interior normal modes with a highly parallel polynomial filtering eigensolver

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Mitigating inter-job interference using adaptive flow-aware routing

Staci A. Smith, Clara E. Cromey, David K. Lowenthal, Jens Domke, Nikhil Jain, Jayaraman J. Thiagarajan, Abhinav Bhatele

Mitigating inter-job interference using adaptive flow-aware routing

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PRISM: predicting resilience of GPU applications using statistical methods

Cham Kalra, Fritz Previlon, Xiangyu Li, Norman Rubin, David R. Kaeli

PRISM: predicting resilience of GPU applications using statistical methods

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Author Comments: PRISM provides a systematic approach to predict failures in GPU programs. PRISM extracts micro-architecture agnostic features to characterize program resiliency, and serves as an effective predictor to drive our statistical model. PRISM can predict failures in applications without running exhaustive fault injection campaigns, thereby reducing the error estimation effort.
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ShenTu: processing multi-trillion edge graphs on millions of cores in seconds

Heng Lin, Xiaowei Zhu, Bowen Yu, Xiongchao Tang, Wei Xue, Wenguang Chen, Lufei Zhang, Torsten Hoefler, Xiaosong Ma, Xin Liu, Weimin Zheng, Jingfang Xu

ShenTu: processing multi-trillion edge graphs on millions of cores in seconds

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Lessons learned from analyzing dynamic promotion for user-level threading

Shintaro Iwasaki, Abdelhalim Amer, Kenjiro Taura, Pavan Balaji

Lessons learned from analyzing dynamic promotion for user-level threading

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Siena: exploring the design space of heterogeneous memory systems

Ivy Bo Peng, Jeffrey S. Vetter

Siena: exploring the design space of heterogeneous memory systems

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faimGraph: high performance management of fully-dynamic graphs under tight memory constraints on the GPU

Martin Winter, Daniel Mlakar, Rhaleb Zayer, Hans-Peter Seidel, Markus Steinberger

faimGraph: high performance management of fully-dynamic graphs under tight memory constraints on the GPU

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High-performance dense tucker decomposition on GPU clusters

Jee W. Choi, Xing Liu, Venkatesan T. Chakaravarthy

High-performance dense tucker decomposition on GPU clusters

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A lightweight model for right-sizing master-worker applications

Nathaniel Kremer-Herman, Benjamín Tovar, Douglas Thain

A lightweight model for right-sizing master-worker applications

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Anatomy of high-performance deep learning convolutions on SIMD architectures

Evangelos Georganas, Sasikanth Avancha, Kunal Banerjee, Dhiraj D. Kalamkar, Greg Henry, Hans Pabst, Alexander Heinecke

Anatomy of high-performance deep learning convolutions on SIMD architectures

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Characterization of MPI usage on a production supercomputer

Sudheer Chunduri, Scott Parker, Pavan Balaji, Kevin Harms, Kalyan Kumaran

Characterization of MPI usage on a production supercomputer

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Fault tolerant one-sided matrix decompositions on heterogeneous systems with GPUs

Jieyang Chen, Hongbo Li, Sihuan Li, Xin Liang, Panruo Wu, Dingwen Tao, Kaiming Ouyang, Yuanlai Liu, Kai Zhao, Qiang Guan, Zizhong Chen

Fault tolerant one-sided matrix decompositions on heterogeneous systems with GPUs

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Accelerating quantum chemistry with vectorized and batched integrals

Hua Huang, Edmond Chow

Accelerating quantum chemistry with vectorized and batched integrals

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167-PFlops deep learning for electron microscopy: from learning physics to atomic manipulation

Robert M. Patton, J. Travis Johnston, Steven R. Young, Catherine D. Schuman, Don D. March, Thomas E. Potok, Derek C. Rose, Seung-Hwan Lim, Thomas P. Karnowski, Maxim A. Ziatdinov, Sergei V. Kalinin

167-PFlops deep learning for electron microscopy: from learning physics to atomic manipulation

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Dynamically negotiating capacity between on-demand and batch clusters

Feng Liu, Kate Keahey, Pierre Riteau, Jon B. Weissman

Dynamically negotiating capacity between on-demand and batch clusters

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HiCOO: hierarchical storage of sparse tensors

Jiajia Li, Jimeng Sun, Richard W. Vuduc

HiCOO: hierarchical storage of sparse tensors

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Redesigning LAMMPS for peta-scale and hundred-billion-atom simulation on Sunway TaihuLight

Xiaohui Duan, Ping Gao, Tingjian Zhang, Meng Zhang, Weiguo Liu, Wusheng Zhang, Wei Xue, Haohuan Fu, Lin Gan, Dexun Chen, Xiangxu Meng, Guangwen Yang

Redesigning LAMMPS for peta-scale and hundred-billion-atom simulation on Sunway TaihuLight

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Optimizing software-directed instruction replication for GPU error detection

Abdulrahman Mahmoud, Siva Kumar Sastry Hari, Michael B. Sullivan, Timothy Tsai, Stephen W. Keckler

Optimizing software-directed instruction replication for GPU error detection

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Scaling embedded in-situ indexing with deltaFS

Qing Zheng, Charles D. Cranor, Danhao Guo, Gregory R. Ganger, George Amvrosiadis, Garth A. Gibson, Bradley W. Settlemyer, Gary Grider, Fan Guo

Scaling embedded in-situ indexing with deltaFS

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Large-scale hierarchical k-means for heterogeneous many-core supercomputers

Liandeng Li, Teng Yu, Wenlai Zhao, Haohuan Fu, Chenyu Wang, Li Tan, Guangwen Yang, John Thomson

Large-scale hierarchical k-means for heterogeneous many-core supercomputers

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ADAPT: algorithmic differentiation applied to floating-point precision tuning

Harshitha Menon, Michael O. Lam, Daniel Osei-Kuffuor, Markus Schordan, Scott Lloyd, Kathryn Mohror, Jeffrey Hittinger

ADAPT: algorithmic differentiation applied to floating-point precision tuning

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Evaluation of an interference-free node allocation policy on fat-tree clusters

Samuel D. Pollard, Nikhil Jain, Stephen Herbein, Abhinav Bhatele

Evaluation of an interference-free node allocation policy on fat-tree clusters

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Detecting MPI usage anomalies via partial program symbolic execution

Fangke Ye, Jisheng Zhao, Vivek Sarkar

Detecting MPI usage anomalies via partial program symbolic execution

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ParSy: inspection and transformation of sparse matrix computations for parallelism

Kazem Cheshmi, Shoaib Kamil, Michelle Mills Strout, Maryam Mehri Dehnavi

ParSy: inspection and transformation of sparse matrix computations for parallelism

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Associative instruction reordering to alleviate register pressure

Prashant Singh Rawat, Aravind Sukumaran-Rajam, Atanas Rountev, Fabrice Rastello, Louis-Noël Pouchet, P. Sadayappan

Associative instruction reordering to alleviate register pressure

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Light-weight protocols for wire-speed ordering

Hans Eberle, Larry Dennison

Light-weight protocols for wire-speed ordering

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Stacker: an autonomic data movement engine for extreme-scale data staging-based in-situ workflows

Pradeep Subedi, Philip E. Davis, Shaohua Duan, Scott Klasky, Hemanth Kolla, Manish Parashar

Stacker: an autonomic data movement engine for extreme-scale data staging-based in-situ workflows

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The design, deployment, and evaluation of the CORAL pre-exascale systems

Sudharshan S. Vazhkudai, Bronis R. de Supinski, Arthur S. Bland, Al Geist, James C. Sexton, Jim Kahle, Christopher Zimmer, Scott Atchley, Sarp Oral, Don E. Maxwell, Verónica G. Vergara Larrea, Adam Bertsch, Robin Goldstone, Wayne Joubert, Chris Chambreau, David Appelhans, Robert Blackmore, Ben Casses, George Chochia, Gene Davison, Matthew A. Ezell, Tom Gooding, Elsa Gonsiorowski, Leopold Grinberg, Bill Hanson, Bill Hartner, Ian Karlin, Matthew L. Leininger, Dustin Leverman, Chris Marroquin, Adam Moody, Martin Ohmacht, Ramesh Pankajakshan, Fernando Pizzano, James H. Rogers, Bryan S. Rosenburg, Drew Schmidt, Mallikarjun Shankar, Feiyi Wang, Py Watson, Bob Walkup, Lance D. Weems, Junqi Yin

The design, deployment, and evaluation of the CORAL pre-exascale systems

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HPL and DGEMM performance variability on the Xeon Platinum 8160 processor

John D. McCalpin

HPL and DGEMM performance variability on the Xeon Platinum 8160 processor

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Dynamic tracing: memoization of task graphs for dynamic task-based runtimes

Wonchan Lee, Elliott Slaughter, Michael Bauer, Sean Treichler, Todd Warszawski, Michael Garland, Alex Aiken

Dynamic tracing: memoization of task graphs for dynamic task-based runtimes

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Lessons learned from memory errors observed over the lifetime of Cielo

Scott Levy, Kurt B. Ferreira, Nathan DeBardeleben, Taniya Siddiqua, Vilas Sridharan, Elisabeth Baseman

Lessons learned from memory errors observed over the lifetime of Cielo

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Runtime data management on non-volatile memory-based heterogeneous memory for task-parallel programs

Kai Wu, Jie Ren, Dong Li

Runtime data management on non-volatile memory-based heterogeneous memory for task-parallel programs

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